Datasets

• pyhealth.datasets.BaseEHRDataset
  • BaseEHRDataset
    • BaseEHRDataset.parse_tables()
    • BaseEHRDataset.available_tables
    • BaseEHRDataset.stat()
    • BaseEHRDataset.info()
    • BaseEHRDataset.set_task()
• pyhealth.datasets.BaseSignalDataset
  • BaseSignalDataset
    • BaseSignalDataset.stat()
    • BaseSignalDataset.info()
    • BaseSignalDataset.set_task()
• pyhealth.datasets.SampleEHRDataset
  • SampleEHRDataset
    • SampleEHRDataset.input_info
    • SampleEHRDataset.patient_to_index
    • SampleEHRDataset.visit_to_index
    • SampleEHRDataset.available_keys
    • SampleEHRDataset.get_distribution_tokens()
    • SampleEHRDataset.stat()
• pyhealth.datasets.SampleSignalDataset
  • SampleSignalDataset
    • SampleSignalDataset.stat()
• pyhealth.datasets.MIMIC3Dataset
  • MIMIC3Dataset
    • MIMIC3Dataset.task
    • MIMIC3Dataset.samples
    • MIMIC3Dataset.patient_to_index
    • MIMIC3Dataset.visit_to_index
    • MIMIC3Dataset.parse_basic_info()
    • MIMIC3Dataset.parse_diagnoses_icd()
    • MIMIC3Dataset.parse_procedures_icd()
    • MIMIC3Dataset.parse_prescriptions()
    • MIMIC3Dataset.parse_labevents()
• pyhealth.datasets.MIMICExtractDataset
  • MIMICExtractDataset
    • MIMICExtractDataset.task
    • MIMICExtractDataset.samples
    • MIMICExtractDataset.patient_to_index
    • MIMICExtractDataset.visit_to_index
    • MIMICExtractDataset.parse_basic_info()
    • MIMICExtractDataset.parse_diagnoses_icd()
    • MIMICExtractDataset.parse_c()
    • MIMICExtractDataset.parse_labevents()
    • MIMICExtractDataset.parse_chartevents()
    • MIMICExtractDataset.parse_vitals_labs()
    • MIMICExtractDataset.parse_interventions()
• pyhealth.datasets.MIMIC4Dataset
  • MIMIC4Dataset
    • MIMIC4Dataset.task
    • MIMIC4Dataset.samples
    • MIMIC4Dataset.patient_to_index
    • MIMIC4Dataset.visit_to_index
    • MIMIC4Dataset.parse_basic_info()
    • MIMIC4Dataset.parse_diagnoses_icd()
    • MIMIC4Dataset.parse_procedures_icd()
    • MIMIC4Dataset.parse_prescriptions()
    • MIMIC4Dataset.parse_labevents()
    • MIMIC4Dataset.parse_hcpcsevents()
• pyhealth.datasets.eICUDataset
  • eICUDataset
    • eICUDataset.task
    • eICUDataset.samples
    • eICUDataset.patient_to_index
    • eICUDataset.visit_to_index
    • eICUDataset.parse_basic_info()
    • eICUDataset.parse_diagnosis()
    • eICUDataset.parse_treatment()
    • eICUDataset.parse_medication()
    • eICUDataset.parse_lab()
    • eICUDataset.parse_physicalexam()
    • eICUDataset.parse_admissiondx()
• pyhealth.datasets.OMOPDataset
  • OMOPDataset
    • OMOPDataset.task
    • OMOPDataset.samples
    • OMOPDataset.patient_to_index
    • OMOPDataset.visit_to_index
    • OMOPDataset.parse_basic_info()
    • OMOPDataset.parse_condition_occurrence()
    • OMOPDataset.parse_procedure_occurrence()
    • OMOPDataset.parse_drug_exposure()
    • OMOPDataset.parse_measurement()
• pyhealth.datasets.SleepEDFDataset
  • SleepEDFDataset
    • SleepEDFDataset.task
    • SleepEDFDataset.samples
    • SleepEDFDataset.patient_to_index
    • SleepEDFDataset.visit_to_index
    • SleepEDFDataset.process_EEG_data()
• pyhealth.datasets.SHHSDataset
  • SHHSDataset
    • SHHSDataset.task
    • SHHSDataset.samples
    • SHHSDataset.patient_to_index
    • SHHSDataset.visit_to_index
    • SHHSDataset.parse_patient_id()
    • SHHSDataset.process_EEG_data()
• pyhealth.datasets.ISRUCDataset
  • ISRUCDataset
    • ISRUCDataset.process_EEG_data()
• pyhealth.datasets.CardiologyDataset
  • CardiologyDataset
    • CardiologyDataset.task
    • CardiologyDataset.samples
    • CardiologyDataset.patient_to_index
    • CardiologyDataset.visit_to_index
    • CardiologyDataset.process_EEG_data()
• pyhealth.datasets.TUABDataset
  • TUABDataset
    • TUABDataset.task
    • TUABDataset.samples
    • TUABDataset.patient_to_index
    • TUABDataset.visit_to_index
    • TUABDataset.process_EEG_data()
• pyhealth.datasets.TUEVDataset
  • TUEVDataset
    • TUEVDataset.task
    • TUEVDataset.samples
    • TUEVDataset.patient_to_index
    • TUEVDataset.visit_to_index
    • TUEVDataset.process_EEG_data()
• pyhealth.datasets.splitter
  • split_by_visit()
  • split_by_patient()
  • split_by_sample()
• pyhealth.datasets.utils
  • hash_str()
  • strptime()
  • padyear()
  • flatten_list()
  • list_nested_levels()
  • is_homo_list()
  • collate_fn_dict()
  • get_dataloader()